PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM04G23960.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 251aa MW: 27974.9 Da PI: 9.2938 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 107.4 | 7.9e-34 | 23 | 77 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp+LHerFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl OGLUM04G23960.1 23 KPRLRWTPDLHERFVDAVTRLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRL 77 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 69.7 | 4.9e-22 | 25 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ OGLUM04G23960.1 25 RLRWTPDLHERFVDAVTRLGGPdkaTPKSVLRLMGmKGLTLYHLKSHLQKYR 76 89*************************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 251 aa Download sequence |
MFEGCYGGVG SAAAAAAATR DPKPRLRWTP DLHERFVDAV TRLGGPDKAT PKSVLRLMGM 60 KGLTLYHLKS HLQKYRLGRQ SKKSAGLELA VADSGDALKY QVEVQRKLQE QLEVQKKLQM 120 RIEAQGRYLK EILEKAQKNI SLDANGSANL SSTRSQITDI NLALSGFMDN ATQVQEENNE 180 LMKPISDDNL KVNNLGFQLY HLGSQESKDV KCTPKTEELL LLDLNIQGGY ELSSRGMQGC 240 ELDLKINQQR R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G45580.1 | 2e-47 | G2-like family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM04G23960.1 |