PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM04G23760.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

WRKY

Protein Properties

Length: 518aa MW: 53347.6 Da PI: 5.3216

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM04G23760.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.5	8.9e-31	267	325	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ OGLUM04G23760.1 267 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 325 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MPPCVWGSHT PLSLLSPPAA WAGERMEGDQ AGGDLTDIVR AGGGAMPGSV VVDLQSTAAE 60 WQLPAEPMLF PPPPSLSSTT DGCGAGGAAG ADIFGGGGGD LFSGLVDPFS SDYSSGADFL 120 DAMPDAMAKV GFDTAVGGGC GGGCGGGGGG GGGSGGHLLD MSRKPLLPRG MPMAAVGGLA 180 APRVMPSPLS PRAIRPYPPI SAGDMMKLGI TAGQAAGCAI DAAVAGMQMS SPRSGGIKRR 240 KNQARKVVCI PAPTAAGGRP SGEVVPSDLW AWRKYGQKPI KGSPYPRGYY RCSSSKGCSA 300 RKQVERSRTD PNMLVITYTS EHNHPWPTQR NALAGSTRSH HSKNSGGGGG SGSKGSQNDK 360 SQQQPSVKEE QKDQATTATT TTTSTITTTN SASPVVVKEE EAALAGSSEA LELERVMDTT 420 AAGVVDHSEL MDHVFSESYK PMIPETGQPD DFFADLAELE SDPMSLIFSK EYMEAKPSGG 480 DHAQEKAMAK ELDPFDMLDW STTTNSSAGS SFEQGKRG

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MPPCVWGSHT PLSLLSPPAA WAGERMEGDQ AGGDLTDIVR AGGGAMPGSV VVDLQSTAAE  60
WQLPAEPMLF PPPPSLSSTT DGCGAGGAAG ADIFGGGGGD LFSGLVDPFS SDYSSGADFL  120
DAMPDAMAKV GFDTAVGGGC GGGCGGGGGG GGGSGGHLLD MSRKPLLPRG MPMAAVGGLA  180
APRVMPSPLS PRAIRPYPPI SAGDMMKLGI TAGQAAGCAI DAAVAGMQMS SPRSGGIKRR  240
KNQARKVVCI PAPTAAGGRP SGEVVPSDLW AWRKYGQKPI KGSPYPRGYY RCSSSKGCSA  300
RKQVERSRTD PNMLVITYTS EHNHPWPTQR NALAGSTRSH HSKNSGGGGG SGSKGSQNDK  360
SQQQPSVKEE QKDQATTATT TTTSTITTTN SASPVVVKEE EAALAGSSEA LELERVMDTT  420
AAGVVDHSEL MDHVFSESYK PMIPETGQPD DFFADLAELE SDPMSLIFSK EYMEAKPSGG  480
DHAQEKAMAK ELDPFDMLDW STTTNSSAGS SFEQGKRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	7e-65	WRKY family protein

Link Out ? help Back to Top
Ensembl	OGLUM04G23760.1