PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM04G21960.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family G2-like
Protein Properties Length: 306aa    MW: 32743.4 Da    PI: 8.5463
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM04G21960.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.21.2e-302376255
          G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                     prlrWt eLH +Fv+a+e LGG++kAtPk il+lm+vkgLt++hvkSHLQ+YR 
  OGLUM04G21960.1 23 PRLRWTGELHCSFVQAIEFLGGQDKATPKLILQLMGVKGLTISHVKSHLQMYRC 76
                     8****************************************************6 PP

2Myb_DNA-binding452.5e-142475148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT e++  +v+a++ lGg    t+k+I + mg kg+t  ++ks++q+y+
  OGLUM04G21960.1 24 RLRWTGELHCSFVQAIEFLGGQdkaTPKLILQLMGvKGLTISHVKSHLQMYR 75
                     89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MGSGGGGCGR NGAVRQYIRS KVPRLRWTGE LHCSFVQAIE FLGGQDKATP KLILQLMGVK  60
GLTISHVKSH LQMYRCSRLG SHGTGRRSEM QPQLQRKHSC GADEQVPREF LCPPLKRTRM  120
GTEATYKGMQ GSQGISEMRT TGTQYCIDDY MQAMAMERRI KEEGLRWQRD AAAAAAADGG  180
AAASNLQTVG CSVQESDPFK IIKPEVHHLG PVLKLQCSKV ENSGFISSST GTAARDQPEP  240
PPLEKCSLSL SLGPDPKCMP AIASSPSESS CILSSSSRSF SDCSGNSGCL VAPGVNLELS  300
MSICGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.16e-29G2-like family protein