PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM04G17340.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 492aa MW: 52669.4 Da PI: 8.1567

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM04G17340.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.2	5.5e-11	271	329	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l++l+ l+se+ OGLUM04G17340.1 271 KRAKRILANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLSMLQRDTTGLTSEN 329 9***********************************************99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MAESRIFGGL KPTKSRLLGP TIRGPPPNGA ATHAPRRILF SFSFSPESQW LGQSSTRACL 60 PPLRSPCLPA PSTASPAYPR LASSAAFASA PARLRSRITL PGGRSPVPPM DPAASAAESS 120 SLSSRDVAAM PDSPPRRAAR HRRAQSEILL GAALPDDIAF DADLGVVGEV GGGGGDDYEE 180 EEDDEEEEME GAGGSRMFEM FLEAGGKLET PEPAAPLPPP PTRPRHQHSM SMDGSTSLAS 240 SAAGVAGRMG ADAKKAISDA KLAELALVDP KRAKRILANR QSAARSKERK MRYIAELERK 300 VQTLQTEATT LSAQLSMLQR DTTGLTSENS DLKIRVQTME QQVRLQDALN DRLRDEIQQL 360 KVATGQVNAN CGKVGNFGLS SFGGANPQGY QRSHIQSLLA AQQLQQLQIH SQHQQQQMHL 420 QQHHHLSTVQ QQLLQEGLPL PGDLKMKGIA AASHAQNAGA SESHALRSEP PVNASFGNPW 480 LTTALLLLLL QE

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MAESRIFGGL KPTKSRLLGP TIRGPPPNGA ATHAPRRILF SFSFSPESQW LGQSSTRACL  60
PPLRSPCLPA PSTASPAYPR LASSAAFASA PARLRSRITL PGGRSPVPPM DPAASAAESS  120
SLSSRDVAAM PDSPPRRAAR HRRAQSEILL GAALPDDIAF DADLGVVGEV GGGGGDDYEE  180
EEDDEEEEME GAGGSRMFEM FLEAGGKLET PEPAAPLPPP PTRPRHQHSM SMDGSTSLAS  240
SAAGVAGRMG ADAKKAISDA KLAELALVDP KRAKRILANR QSAARSKERK MRYIAELERK  300
VQTLQTEATT LSAQLSMLQR DTTGLTSENS DLKIRVQTME QQVRLQDALN DRLRDEIQQL  360
KVATGQVNAN CGKVGNFGLS SFGGANPQGY QRSHIQSLLA AQQLQQLQIH SQHQQQQMHL  420
QQHHHLSTVQ QQLLQEGLPL PGDLKMKGIA AASHAQNAGA SESHALRSEP PVNASFGNPW  480
LTTALLLLLL QE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	5e-65	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM04G17340.1