PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM04G13050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | C3H | ||||||||
Protein Properties | Length: 173aa MW: 19540.9 Da PI: 6.7321 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 21.4 | 4.4e-07 | 99 | 122 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 y+ e Cr++++ C++ ++C+FaH+ OGLUM04G13050.1 99 YGVEVCRDYLK-NMCNR-ESCRFAHP 122 899********.*****.*******9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MVCRDFTRGR CSRSANECRF LHHSPLEDCA IVCQDFLRGR CDRKSCRYSH VMAHPMPPPM 60 RDIPMQYPDM VYMPPPAPLG VPMMMPPPSA PAAFSGNNYG VEVCRDYLKN MCNRESCRFA 120 HPDLNNEFAV ILSEENAIDL PVAFTIHLQA QILLDKVNIE CPALLPLLPL CCC |
Link Out ? help Back to Top | |
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Ensembl | OGLUM04G13050.1 |