PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM04G11340.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family S1Fa-like
Protein Properties Length: 76aa    MW: 8473.17 Da    PI: 10.6608
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM04G11340.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA131.81.8e-41976470
             S1FA  4 akvea.kGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                      ++e+ kGlnPG ivllvv++ll++f+vgny+ly+yaqk+lPPrkkkPvskkklkreklkqGv++PGe
  OGLUM04G11340.1  9 IIEEVnKGLNPGTIVLLVVATLLILFFVGNYALYMYAQKTLPPRKKKPVSKKKLKREKLKQGVSAPGE 76
                     456777*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
MADQSNNMII EEVNKGLNPG TIVLLVVATL LILFFVGNYA LYMYAQKTLP PRKKKPVSKK  60
KLKREKLKQG VSAPGE