PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM04G11330.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | S1Fa-like | ||||||||
Protein Properties | Length: 89aa MW: 9903.79 Da PI: 10.5242 | ||||||||
Description | S1Fa-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | S1FA | 139.5 | 7.2e-44 | 20 | 89 | 2 | 70 |
S1FA 2 avakvea.kGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70 +v+++e+ kGlnPG+ivl+vv+++ll+f+vgny+lyvyaqk+lPPrkkkPvskkk+kreklkqGv++PGe OGLUM04G11330.1 20 NVVIEEVnKGLNPGMIVLIVVATFLLLFFVGNYALYVYAQKTLPPRKKKPVSKKKMKREKLKQGVSAPGE 89 67788888*************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 89 aa Download sequence |
MTCVWSRSAM ADQFADSANN VVIEEVNKGL NPGMIVLIVV ATFLLLFFVG NYALYVYAQK 60 TLPPRKKKPV SKKKMKREKL KQGVSAPGE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37120.1 | 1e-12 | S1Fa-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM04G11330.1 |