PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM04G10750.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 270aa    MW: 28002.2 Da    PI: 10.3259
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM04G10750.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.3e-2167116255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae+Aa a+++a+++++g
  OGLUM04G10750.1  67 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEDAAIAYDEAALRFKG 116
                      7********.**********94....45***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MVTALAHVIR AAPDLHLPHH PSSSASAAAH PQQASSFYPT AAAAASSPSD QLAAAAAAAE  60
EQGRRRHYRG VRQRPWGKWA AEIRDPKKAA RVWLGTFDTA EDAAIAYDEA ALRFKGTKAK  120
LNFPERVQGR TDLGFLVTRG IPPAATHGGG YYPSSSPAAG AMPPPPRQQQ TVVPYPDLMR  180
YAQLLQGGVG GSYMPFGGAA TMSSSTVSSS SAPQILDFST QQLIRAGPPS PMPSSGSGSA  240
TAAASSTTSA SSPGAWPYGG SERKKKDSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.11e-22ERF family protein