PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM04G06590.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bHLH | ||||||||
Protein Properties | Length: 270aa MW: 28615.9 Da PI: 7.0456 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.2 | 3.1e-13 | 98 | 143 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + ++Er RR+r+N++++ Lr ++Pk +K++Ka+i++ A+ +I +Lq OGLUM04G06590.2 98 NIAMERDRRKRLNEKLFALRAVVPKI-----TKMDKASIVRDAIAHIEKLQ 143 6789*********************7.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MEAAADMGVL LDLYWHTPHI FDLAVADSLL MDGFGGGMYV PAPAPATPAM VEKEYDESLS 60 ELYAYTSQSR YANSSSPDVV NSCSTAAVSA AAAASSKNIA MERDRRKRLN EKLFALRAVV 120 PKITKMDKAS IVRDAIAHIE KLQEEERQLL DEISVLQSTA AAAAAATTVV KDDNGGVAMP 180 RMKKLRSTPP LDGGGGALRV TSSPSLQILE LQASKVGEKT VAVSIRCAKT RGAMAKVCHA 240 VESLRLKVVS ASVAAVDGTI VHTMLVEVTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.2 | 6e-40 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM04G06590.2 |