PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM04G00800.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family C3H
Protein Properties Length: 694aa    MW: 76656.1 Da    PI: 7.2785
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM04G00800.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.22.2e-061121241426
                      --TTTTT-SS-SS CS
          zf-CCCH  14 tCkyGdrCkFaHg 26 
                       CkyGd+C+F+H+
  OGLUM04G00800.2 112 SCKYGDSCRFSHD 124
                      7***********6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 694 aa     Download sequence    
MPPHRAATMA ATAAAAAAAP PADLPDSSPA ASSPPRPSPE ELVARAVAPV KPAFLRPPPV  60
RDAPKDEGKA NGGGAVVAEK KSKRQLKRER KQEQKSSSHL CIEVGKSGNV SSCKYGDSCR  120
FSHDIDAYLA QKPADLEGMC PFTSLDQLCP YGLTCRFLGT HKYIHAASGN LSEKHEINAL  180
NKDIQKLLWK NKYKFPKASA QIKLLGLKEV IKSKPDAAND DKKVNHDNLD GNGDEKKEPL  240
CNPPVNAECD STLCEELDRS EGEPLIDNSI TCVEPRPTKK SKVESDEIDK HGAGTLNTKV  300
ESEDPNLSNG LEVPSNNASS CRTDLITTPH LREKKIIDFR EKLYLAPLTT VGNLPFRRLC  360
KTLGADITCG EMAMCTNLLQ GQASEWALLR RHSSEDLFGV QICGAYPDTV ARTVELVDNE  420
CSVDFIDINM GCPIDIVVNK GAGSSLLTKP MRIKSIVQAA STVTEKPLTV KVRTAFFEGR  480
NRADSIVSDI YDWGASAITV HGRSRQQRYS KLADWDYIYQ CAQKAPDQLH VVGNGDVFSF  540
TDWNKHVSGC SKISTCMIAR GALIKPWIFT EIKEQRHWDI TSGERFNILK DFVSFGLEHW  600
GSDSKGVETT RYFLLEWLSY TCRYIPVGLL DVIPQRLNWR PPSYCGRDDL ETLMISDSAA  660
DWIRISEMLL GKVPEGFTFT PKHKSNAYDR AENG