PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G41640.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 221aa MW: 23690.4 Da PI: 6.3995 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.8 | 1.3e-18 | 76 | 125 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr ++ +g+++AeIrd + ng r++lg+f++aeeAa a+++a+ +++g OGLUM03G41640.1 76 FRGVRKRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAEEAALAYDQAAFAMRG 125 79******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MSLHPHRRHG DGDVDGSASG SGSARLTAGL INFLESRRAG AMSTTNSSSS VSVPAMDAHG 60 QEEEEEPMQV QQQQAFRGVR KRPWGKFAAE IRDSTRNGVR VWLGTFDSAE EAALAYDQAA 120 FAMRGSAAVL NFPMEQVRRS MDMSLLQEGA SPVVALKRRH SMRAAAAGRR RKSAAPAPAD 180 QEGGGGVMEL EDLGPDYLEE LLAASQPIDI TCCTSPSHHS I |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 157 | 172 | KRRHSMRAAAAGRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 1e-30 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G41640.1 |