PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G41360.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | MYB_related | ||||||||
Protein Properties | Length: 87aa MW: 9561.03 Da PI: 4.7516 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29 | 2.4e-09 | 4 | 48 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +W++ E ++ +a + + ++ +W++Ia +g g+t+ +++ ++ OGLUM03G41360.1 4 SWSESENARFEQALATYDSDnpnRWELIATAVGGGKTADDVRRHY 48 6*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 87 aa Download sequence |
MAASWSESEN ARFEQALATY DSDNPNRWEL IATAVGGGKT ADDVRRHYDH LQHDVTTIDD 60 DHSHAAGEAL PNGNNNNNTN KGNRNQA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 5e-19 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G41360.1 |