PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G41320.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

WRKY

Protein Properties

Length: 391aa MW: 42220.2 Da PI: 7.2983

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G41320.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98	6.1e-31	202	260	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY+ eHnh+ OGLUM03G41320.1 202 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCMARKQVERSRSDPNMLVITYTAEHNHP 260 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MDMMEEEAAN AATAQAAAAG DLADVVARAN ARAFLVSTPH HHPSPLHPLP PPPPPMPQAP 60 HQYYPAPQIT IPYHHHHHHG ELRRPTTIAY TDAPVPFETA GPPSTVVDSY HHLTPGDAGY 120 GMPRPLALQI SQHALCGGGD VVMGSGGAGA ADDGEEAIRI SPLTPSAHHQ MMKRKNEVKK 180 VVCIPAPPAT SSRGGGGEVI PSDLWAWRKY GQKPIKGSPY PRGYYRCSSS KGCMARKQVE 240 RSRSDPNMLV ITYTAEHNHP WPMQRNVLAG YARSHHSTHA TASSSRHKQQ QQQQTNQLQP 300 ALITSSSSSS SSPFNLYADV VLGGQQANMM MTTTEGAGTG LGIQPSAADE VFAELEELEP 360 DNPTMINANM QVYSTTSRPG VSSYDHQWHK F

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MDMMEEEAAN AATAQAAAAG DLADVVARAN ARAFLVSTPH HHPSPLHPLP PPPPPMPQAP  60
HQYYPAPQIT IPYHHHHHHG ELRRPTTIAY TDAPVPFETA GPPSTVVDSY HHLTPGDAGY  120
GMPRPLALQI SQHALCGGGD VVMGSGGAGA ADDGEEAIRI SPLTPSAHHQ MMKRKNEVKK  180
VVCIPAPPAT SSRGGGGEVI PSDLWAWRKY GQKPIKGSPY PRGYYRCSSS KGCMARKQVE  240
RSRSDPNMLV ITYTAEHNHP WPMQRNVLAG YARSHHSTHA TASSSRHKQQ QQQQTNQLQP  300
ALITSSSSSS SSPFNLYADV VLGGQQANMM MTTTEGAGTG LGIQPSAADE VFAELEELEP  360
DNPTMINANM QVYSTTSRPG VSSYDHQWHK F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	5e-55	WRKY family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G41320.1