PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G38970.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 416aa MW: 41276.6 Da PI: 9.2488

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G38970.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.9	1.1e-38	116	176	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e lkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+++ OGLUM03G38970.1 116 PEPGLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTK 176 56789*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MVFSSVPAVY LDPPNWNQQQ QQAHHGQLPS GGNGGGGGGG GGGVDAHHHH HHHHQLPPMP 60 PHHGGLMAPR PDMVAAALAA SGGGGGGGGG GGPTGGTAVR PGSMTERARL AKIPQPEPGL 120 KCPRCESTNT KFCYFNNYSL SQPRHFCKTC RRYWTRGGAL RNVPVGGGCR RNKRTKSSKS 180 SSSTSAAGSA SATGGTSSST SSTATGGSSS AAAAAAMMPP QAQLPFLASL HHPLGGGDHY 240 SSGASRLGFP GLSSLDPVDY QLGGAAAAAA AIGLEQWRLP QIQQFPFLSR NDAMPPPMSG 300 IYPFDAEAAA DAAGFAGQLL AGTKVPGSSG LITQLASVKM EDSNAQSAAM NSSPREFLGL 360 PGNLQFWGGG NGAGPGGNGD GATGGSGAGV APGGGGGGGG WADLSGFNSS SSGNIL

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MVFSSVPAVY LDPPNWNQQQ QQAHHGQLPS GGNGGGGGGG GGGVDAHHHH HHHHQLPPMP  60
PHHGGLMAPR PDMVAAALAA SGGGGGGGGG GGPTGGTAVR PGSMTERARL AKIPQPEPGL  120
KCPRCESTNT KFCYFNNYSL SQPRHFCKTC RRYWTRGGAL RNVPVGGGCR RNKRTKSSKS  180
SSSTSAAGSA SATGGTSSST SSTATGGSSS AAAAAAMMPP QAQLPFLASL HHPLGGGDHY  240
SSGASRLGFP GLSSLDPVDY QLGGAAAAAA AIGLEQWRLP QIQQFPFLSR NDAMPPPMSG  300
IYPFDAEAAA DAAGFAGQLL AGTKVPGSSG LITQLASVKM EDSNAQSAAM NSSPREFLGL  360
PGNLQFWGGG NGAGPGGNGD GATGGSGAGV APGGGGGGGG WADLSGFNSS SSGNIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02460.1	2e-43	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G38970.1