PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G37110.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 424aa MW: 44213.9 Da PI: 4.8606

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G37110.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42	2e-13	233	285	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 + +rrkq+NRe+ArrsR RK a + eLe v +L eN++L +l ++++ OGLUM03G37110.1 233 RLQRRKQSNRESARRSRSRKAAHLNELEAQVSQLRVENSSLLRRLADVNQKYN 285 789***************************************99988888776 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MERVFSVEEI SDPFWVPPPP PQSAAAAQQQ GGGGCVASGG GGGVAGGGGG GNAMNRCPSE 60 WYFQKFLEEA VLDSPVPNPS PRAEAGGIRG AGGVVPVDVK QPQLSAAAAA TTSAVVDPVE 120 YNAMLKQKLE KDLAAVAMWR ASGTVPPERP GAGSSLLNAD VSHIGAPNSI GGNATPVQNM 180 LSGPSGGSGS QLVQNVDVLV KQPTSSSSRE QSDDDDMEGE AETTGTARPA DQRLQRRKQS 240 NRESARRSRS RKAAHLNELE AQVSQLRVEN SSLLRRLADV NQKYNDAAVD NRVLKADVET 300 LRAKVKMAED SVKRVTGMNA LFPAASDMSS LSMPFNSSPS EATSDAAVPI QDDPNNYFAT 360 NNDIGGNNNY MPDIPSSAQE DEDFVNGALA AGKIGRTASL QRVASLEHLQ KRMCGGPASS 420 GSTS

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MERVFSVEEI SDPFWVPPPP PQSAAAAQQQ GGGGCVASGG GGGVAGGGGG GNAMNRCPSE  60
WYFQKFLEEA VLDSPVPNPS PRAEAGGIRG AGGVVPVDVK QPQLSAAAAA TTSAVVDPVE  120
YNAMLKQKLE KDLAAVAMWR ASGTVPPERP GAGSSLLNAD VSHIGAPNSI GGNATPVQNM  180
LSGPSGGSGS QLVQNVDVLV KQPTSSSSRE QSDDDDMEGE AETTGTARPA DQRLQRRKQS  240
NRESARRSRS RKAAHLNELE AQVSQLRVEN SSLLRRLADV NQKYNDAAVD NRVLKADVET  300
LRAKVKMAED SVKRVTGMNA LFPAASDMSS LSMPFNSSPS EATSDAAVPI QDDPNNYFAT  360
NNDIGGNNNY MPDIPSSAQE DEDFVNGALA AGKIGRTASL QRVASLEHLQ KRMCGGPASS  420
GSTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	6e-34	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G37110.1