PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G35430.2

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

TALE

Protein Properties

Length: 351aa MW: 38226.8 Da PI: 6.3462

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G35430.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.5e-09	263	297	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps+ e+ LA+ +gL+++q+ +WF N+R ++ OGLUM03G35430.2 263 KWPYPSEMEKMTLAQTTGLDQKQINNWFINQRKRH 297 669*****************************885 PP
2	ELK	37.6	4.8e-13	217	238	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LKhqLlrKY+g+Lg+L+q Fs OGLUM03G35430.2 217 QLKHQLLRKYGGSLGDLRQVFS 238 59*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MESFASLAGG GSSSTTARLP ELISPENPDH ISPPPLLYQL LAGPESSARQ HGHDGHHHGG 60 GGGAAAAAAV QGQVSPAGAE AAVKAEIMSH PEYSALLAAY LGCKKVGAPP DVLTKLTAVP 120 AAQQLDEADG HPRRRHEPQR DDDPDQLDQF MDAYCSMLTR YREELERPIQ EAAEFFSRVE 180 TQLDSLADSN CEGTGSSEEE QDTSCPEAEE IDPSDKQLKH QLLRKYGGSL GDLRQVFSKR 240 TKKGKLPKEA RQKLLHWWEL HYKWPYPSEM EKMTLAQTTG LDQKQINNWF INQRKRHWKP 300 TPVAGTAFPT MEAAGGGFRH SGHGGGLAAA AALPLYMGKP FVVDGMYRLG S

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MESFASLAGG GSSSTTARLP ELISPENPDH ISPPPLLYQL LAGPESSARQ HGHDGHHHGG  60
GGGAAAAAAV QGQVSPAGAE AAVKAEIMSH PEYSALLAAY LGCKKVGAPP DVLTKLTAVP  120
AAQQLDEADG HPRRRHEPQR DDDPDQLDQF MDAYCSMLTR YREELERPIQ EAAEFFSRVE  180
TQLDSLADSN CEGTGSSEEE QDTSCPEAEE IDPSDKQLKH QLLRKYGGSL GDLRQVFSKR  240
TKKGKLPKEA RQKLLHWWEL HYKWPYPSEM EKMTLAQTTG LDQKQINNWF INQRKRHWKP  300
TPVAGTAFPT MEAAGGGFRH SGHGGGLAAA AALPLYMGKP FVVDGMYRLG S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	4e-72	TALE family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G35430.2