PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G35130.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 392aa MW: 40241.3 Da PI: 6.9227

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G35130.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.8e-32	121	174	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ OGLUM03G35130.1 121 PRMRWTTALHARFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 174 9****************************************************7 PP
2	Myb_DNA-binding	49.9	7.2e-16	122	173	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ OGLUM03G35130.1 122 RMRWTTALHARFVHAVELLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 173 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MLQRNLPNLS LRISPPAVSS AAAPVSSGTP TTAARTTLPT GVITDAEGGG EVAAFFGNPS 60 SGSEPPGLSL GLGPTTPAHA DAGGGRHGDH HLQPQGCAPF KRAAARASQL PAGSKRSVRA 120 PRMRWTTALH ARFVHAVELL GGHERATPKS VLELMNVKDL TLAHVKSHLQ MYRTVKSTDR 180 SSHIASGEAQ LQQQAGMEVA MEAAAGGGGN GGGGGGGVVL PMMPACDDMV GICSSPAPPA 240 AATSSAAAYF LCATTTSTAT APLAVVPSPP APTIPTRRTD QTPVLEKGVA IVDSLHRCQK 300 HNYSPVLQDA LHQGAEEDHL ITGNLPMGGA SAQASIEAMA TTNSSSPASS SPSLASLEQL 360 LPEDSFAPNL EISLGRQNWN MDHPEELSLK YL

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MLQRNLPNLS LRISPPAVSS AAAPVSSGTP TTAARTTLPT GVITDAEGGG EVAAFFGNPS  60
SGSEPPGLSL GLGPTTPAHA DAGGGRHGDH HLQPQGCAPF KRAAARASQL PAGSKRSVRA  120
PRMRWTTALH ARFVHAVELL GGHERATPKS VLELMNVKDL TLAHVKSHLQ MYRTVKSTDR  180
SSHIASGEAQ LQQQAGMEVA MEAAAGGGGN GGGGGGGVVL PMMPACDDMV GICSSPAPPA  240
AATSSAAAYF LCATTTSTAT APLAVVPSPP APTIPTRRTD QTPVLEKGVA IVDSLHRCQK  300
HNYSPVLQDA LHQGAEEDHL ITGNLPMGGA SAQASIEAMA TTNSSSPASS SPSLASLEQL  360
LPEDSFAPNL EISLGRQNWN MDHPEELSLK YL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.2	2e-39	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G35130.1