PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G35000.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family Dof
Protein Properties Length: 348aa    MW: 35556.1 Da    PI: 9.803
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G35000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1214.3e-3866123360
           zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 
                      ++ l+cprC+s+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rk + 
  OGLUM03G35000.1  66 QAPLRCPRCNSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKPRP 123
                      66789**************************************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MDQLKGASAL NHASLPVVLQ PIVSNPSPTS SSSTSSRSSA QATQQRSSSA TSSPHGQGQG  60
GGAAEQAPLR CPRCNSSNTK FCYYNNYNLT QPRHFCKTCR RYWTKGGALR NVPIGGGCRK  120
PRPMPAPVAK PPMSCKAAPP LGLGGGPVSW ASGQQAATAH LMALLNSARG VQGHGGSNVH  180
RLLGLDTMGH LQILPGAPNG AGAGTAASLW PQSAPRPVTP PPHMDSQLGM GTLGHHDVLS  240
SLGLKLPSSA SSSPAASYYS DQLHAVVSNA GRPQAPYDVA TASLPCTTAV TSLPSALSSV  300
SAAAPTSNTV GMDLPPVSLA APEMQYWNGP AAMSVPWPDL PTPNGAFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07640.12e-30Dof family protein