PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G34980.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 348aa MW: 37315.9 Da PI: 7.506

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G34980.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.6e-32	224	279	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k r++W+peLH++Fv a++qLGG+++AtPk+i+e+mkv+gLt+++vkSHLQkYRl+ OGLUM03G34980.1 224 KSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLH 279 68****************************************************97 PP
2	Myb_DNA-binding	44.2	4.3e-14	226	277	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v a +qlGg+ t+k I + m g+t ++ks++qky+ OGLUM03G34980.1 226 RRCWSPELHRQFVAALQQLGGPqvaTPKQIREVMKvDGLTNDEVKSHLQKYR 277 568************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MGLDVGEIGM GLDLSLDLKM FAARSAVRMA AAAAKEATGV EACIRSLEEE RRKIEMFRRE 60 LPLCARLLAD VIELMKEEAG KRRKDGDDAE AKAEDGDKTK WMSTAQLWVD SRGSDADSEN 120 DRRSGSTSPA SRLLGGAEES SSRAVSPPPY FRREERVVLR PAMPLLPPAS HRSPPPAAAA 180 AATAAGDDHR HVVASSFATA VPSPVPAALS LQAQAQQQQQ QARKSRRCWS PELHRQFVAA 240 LQQLGGPQVA TPKQIREVMK VDGLTNDEVK SHLQKYRLHN RKSPGTASAS HSIVLVGDLW 300 ASQEVSCSQS GSPQGPLQLS GSGVAVSAAT AGDSCCEDDD KSEGYVRK

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MGLDVGEIGM GLDLSLDLKM FAARSAVRMA AAAAKEATGV EACIRSLEEE RRKIEMFRRE  60
LPLCARLLAD VIELMKEEAG KRRKDGDDAE AKAEDGDKTK WMSTAQLWVD SRGSDADSEN  120
DRRSGSTSPA SRLLGGAEES SSRAVSPPPY FRREERVVLR PAMPLLPPAS HRSPPPAAAA  180
AATAAGDDHR HVVASSFATA VPSPVPAALS LQAQAQQQQQ QARKSRRCWS PELHRQFVAA  240
LQQLGGPQVA TPKQIREVMK VDGLTNDEVK SHLQKYRLHN RKSPGTASAS HSIVLVGDLW  300
ASQEVSCSQS GSPQGPLQLS GSGVAVSAAT AGDSCCEDDD KSEGYVRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	3e-40	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G34980.1