PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G34610.3
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 442aa    MW: 46501.5 Da    PI: 6.564
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G34610.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY919e-29197253259
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      +DgynWrKYGqK+ k++e prsYY+Ct  gCpvkk vers+ d+ + eitY+g+H h+
  OGLUM03G34610.3 197 KDGYNWRKYGQKQLKDAESPRSYYKCTRDGCPVKKIVERSS-DGCIKEITYKGRHSHP 253
                      8****************************************.***************8 PP
2WRKY103.31.3e-32342400159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDgy+WrKYGqK+vkg++ prsYY+Ct  gC+v+k++er++ dpk+v +tY+g+Hnh+
  OGLUM03G34610.3 342 LDDGYRWRKYGQKVVKGNPRPRSYYKCTADGCNVRKQIERASADPKCVLTTYTGRHNHD 400
                      59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
MADRRRSDGG GGGGGMQQQP FTSPGQERVF DGGGVPGQVA APYGSDFDQS SYMALLAAGA  60
VGVGVGVQPT AAPWAVEEDV AAAPPGISLA PQFSMANYAP PPSYQHPATL VSPPLAAGLH  120
PYPPYLHGVD APPPQWPPRP APPPSFSVLD LAAAAAPHEQ RHSMQQLLLR AAAFGGGMHA  180
AAAPAPAAAA AIEQPAKDGY NWRKYGQKQL KDAESPRSYY KCTRDGCPVK KIVERSSDGC  240
IKEITYKGRH SHPRPVEPRR GGAASSSSST MAAGTDHNAG AAADDAAAAD EDDPSDDDDT  300
LLHEDDDDGE EGHDRGVDGE VGQRVVRKPK IILQTRSEVD LLDDGYRWRK YGQKVVKGNP  360
RPRSYYKCTA DGCNVRKQIE RASADPKCVL TTYTGRHNHD PPGRPPAAAN LQMPGPAAMS  420
LAGGGTAHQQ PSGGAHQMKE ET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.18e-37WRKY family protein