PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G32890.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family GATA
Protein Properties Length: 271aa    MW: 29045.8 Da    PI: 6.8859
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G32890.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.72e-15166202135
             GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                      C+nCg ++  Tp +Rrgp g+++LCnaCGl+++ kg+
  OGLUM03G32890.1 166 CQNCGISSrlTPAMRRGPAGPRSLCNACGLMWANKGT 202
                      **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MAAEPPADGR DPPADYGAAG DGAVESAAAE ALLSAASEQL TLVYQGEVYV FDPVPPQKVQ  60
AVLLVLGGSD MPPGLVSMAV PTTFDEKSTT VAARRVASLM RFREKRKERC FDKKIRYSVR  120
KEVAQKMKRR KGQFAGRADF GDGSCSSAPC GSTANGEDDH IRETHCQNCG ISSRLTPAMR  180
RGPAGPRSLC NACGLMWANK GTLRSPLNAP KMTVQHPADL SKTGDTDDSK ANLCAEHNQT  240
TMKTDTEMVP EQEQKADVLP PTKEEDSMAA S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.24e-54GATA family protein