PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G32710.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

TALE

Protein Properties

Length: 870aa MW: 90418.8 Da PI: 6.7288

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G32710.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.2	3.2e-09	661	698	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + OGLUM03G32710.1 661 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 698 564459******************************88 PP
2	BELL	91.1	1.1e-29	537	592	17	72
BELL 17 eeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + Vd+rY++y++q+q+v++ F+ v+g g+a+pYt+lA+ka+SrhFrcLkdaia q+ OGLUM03G32710.1 537 DDVDRRYNHYCDQMQMVVNFFDSVMGFGAATPYTALAQKAMSRHFRCLKDAIAAQL 592 68***************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 870 aa Download sequence
MERRRSRRQQ AFHPVAAEEE EEEGLVVVGR RSTADDGDSG AAGMGIAAPP CQPGQTTTFV 60 ISQPTSSKSS PAAIVVRPPA TASSSSMSHS QGFHQPSSGA VFGFSSDGFD GRPGSGQDHQ 120 QHEQQQQQHV AQQSRRDKLR VQGFDPAAAA AGHGLLPIEG DEHGADPGAM YDHAEAAAAG 180 ASNMLSEMFN FPSQPPTGPS ATELLASQMN ANYRFGFRQA AGLAGGEGGW FGGGGAAGRT 240 GLVLGGASLG SLGETSSPKQ QAGGMAGLAA DPAAAMHLFL MNPQQQQQQS RSSTSPPPSD 300 AQSAIHQHHE AFQAFGGAGA AAFGGGAAAG VVEGQGLSLS LSPSLQQLEM AKQAEELRVR 360 DGVLYFNRQQ QQQQAAAAAA SVQQQLPMAL HGQVGVLGQQ LHGGGYGGPA GIAGVLRNSK 420 YTRAAQELLE EFCSVGRGQI KGGGGRGSAP NNPNSSKAAA GAASSSGAAQ SPSSASKEPP 480 QLSPAERFEH QRKKAKLISM LDEARIHLSS PLACMAPSIY SPPPTHRRHA SADVDDDDVD 540 RRYNHYCDQM QMVVNFFDSV MGFGAATPYT ALAQKAMSRH FRCLKDAIAA QLRGTCEALG 600 EKDAGTGSGL TKGETPRLRA IDQSLRQQRA FHHMGIMEQE AWRPQRGLPE RSVNILRSWL 660 FEHFLHPYPS DADKHLLARQ TGLSRNQVSN WFINARVRLW KPMIEEMYQQ ECKELEGSSG 720 AGDDPSGADD THSPTTTAAA HHQHRHGQLM VEHGGASSGG GAALSSHKHE PGVVAGPSSS 780 SAAAVADAAF VGIDPVELLG GDGAAADDLY GRFDPAGAVR VRYGPAGAAA GGAAAAAGDV 840 SLTLGLQHAG AGNAGPDGSG RFSLRDYSGC

Sequence ? help Back to Top

Protein Sequence Length: 870 aa Download sequence

MERRRSRRQQ AFHPVAAEEE EEEGLVVVGR RSTADDGDSG AAGMGIAAPP CQPGQTTTFV  60
ISQPTSSKSS PAAIVVRPPA TASSSSMSHS QGFHQPSSGA VFGFSSDGFD GRPGSGQDHQ  120
QHEQQQQQHV AQQSRRDKLR VQGFDPAAAA AGHGLLPIEG DEHGADPGAM YDHAEAAAAG  180
ASNMLSEMFN FPSQPPTGPS ATELLASQMN ANYRFGFRQA AGLAGGEGGW FGGGGAAGRT  240
GLVLGGASLG SLGETSSPKQ QAGGMAGLAA DPAAAMHLFL MNPQQQQQQS RSSTSPPPSD  300
AQSAIHQHHE AFQAFGGAGA AAFGGGAAAG VVEGQGLSLS LSPSLQQLEM AKQAEELRVR  360
DGVLYFNRQQ QQQQAAAAAA SVQQQLPMAL HGQVGVLGQQ LHGGGYGGPA GIAGVLRNSK  420
YTRAAQELLE EFCSVGRGQI KGGGGRGSAP NNPNSSKAAA GAASSSGAAQ SPSSASKEPP  480
QLSPAERFEH QRKKAKLISM LDEARIHLSS PLACMAPSIY SPPPTHRRHA SADVDDDDVD  540
RRYNHYCDQM QMVVNFFDSV MGFGAATPYT ALAQKAMSRH FRCLKDAIAA QLRGTCEALG  600
EKDAGTGSGL TKGETPRLRA IDQSLRQQRA FHHMGIMEQE AWRPQRGLPE RSVNILRSWL  660
FEHFLHPYPS DADKHLLARQ TGLSRNQVSN WFINARVRLW KPMIEEMYQQ ECKELEGSSG  720
AGDDPSGADD THSPTTTAAA HHQHRHGQLM VEHGGASSGG GAALSSHKHE PGVVAGPSSS  780
SAAAVADAAF VGIDPVELLG GDGAAADDLY GRFDPAGAVR VRYGPAGAAA GGAAAAAGDV  840
SLTLGLQHAG AGNAGPDGSG RFSLRDYSGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23760.2	1e-113	TALE family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G32710.1