PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G29400.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | TALE | ||||||||
Protein Properties | Length: 333aa MW: 36646.1 Da PI: 6.9631 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 31.9 | 2.3e-10 | 250 | 283 | 22 | 55 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yps++e++ LA+++gL+++qV++WF N+R ++ OGLUM03G29400.1 250 WPYPSEAEKAALAESTGLDKKQVTNWFINQRKRH 283 58*****************************885 PP | |||||||
2 | ELK | 33.4 | 9.6e-12 | 203 | 222 | 3 | 22 |
ELK 3 KhqLlrKYsgyLgsLkqEFs 22 +++L++KYsgyL+sL++E+s OGLUM03G29400.1 203 RRHLMNKYSGYLNSLWTEIS 222 79*****************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MEQLHLLLAS GGGSKASTTI TPFCLARDHA STSSPSPAAV AAPAPPPEAE QSIHGSGTGL 60 QSSEAMIKAK IMSHPLYPSL LRAFVDCKKV GAPPEVVGRL SSLAVVTDVP QYSGDRWLPA 120 QQPAADPELD QFMETYCYML TRYGQELARP IQEAEEFFRG IEEQIDSLAL DEDVSYDYED 180 EVAGGLPEKS AAFGENEVTT TRRRHLMNKY SGYLNSLWTE ISNKKKNSTG HLPRDARHKL 240 LQWWHLHYRW PYPSEAEKAA LAESTGLDKK QVTNWFINQR KRHWKPKPAA AMDAGFLQMH 300 PRYGASSSSS PAAALRVEDG GGGRSAYHPR GGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G08150.1 | 4e-65 | TALE family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G29400.1 |