PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G29380.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

TALE

Protein Properties

Length: 337aa MW: 36727 Da PI: 5.6592

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G29380.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.9	8.3e-09	247	280	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yps+ e++ LA+++gL+ +q+ +WF N+R ++ OGLUM03G29380.1 247 WPYPSELEKAALAESTGLDAKQINNWFINQRKRH 280 59*****************************885 PP
2	ELK	35.7	1.8e-12	200	221	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +Ll+KYsgyL+sL+ E+s OGLUM03G29380.1 200 ELKSHLLNKYSGYLSSLWRELS 221 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MEQQLPLLAP DSKAATSSPL CLTLDNPTST STSPAVPSSA PPPAAALEPS RQSFHERETD 60 AIKAKIMSHP LYPALLRAFI DCQKVGAPPE VVGRLSALAG ELDSRAEDRH LQGQSSDPEL 120 DEFMETYIDM LVSYRQELTR PIQEADQFFR NMEAQIDSFT LDDNGSEGGN SSEDEQEAGG 180 GDMASAGLPE ITSPCAEDKE LKSHLLNKYS GYLSSLWREL SKKKKKGKLP RDARQKLLHW 240 WQLHYRWPYP SELEKAALAE STGLDAKQIN NWFINQRKRH WKPTPPAMEY RSLQPAGAAS 300 YGGASAGAST SGGGSAVVRG MEGQHFTGGG AYPRGGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-84	TALE family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G29380.1