PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G28630.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family G2-like
Protein Properties Length: 513aa    MW: 56110.1 Da    PI: 7.3733
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G28630.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like673.3e-21357411455
          G2-like   4 lrWtpeLHerFveaveqLGGsekAtPkti...lelmkvkgLtlehvkSHLQkYRl 55 
                      lrW+ +LH+ Fveav+  GG+ +A P ++   +++m+v gLt +++kSHLQkYR 
  OGLUM03G28630.1 357 LRWSDDLHKMFVEAVAYHGGPYEAKPTAVketMQAMGVTGLTTHNIKSHLQKYRE 411
                      89************************777222667889****************5 PP
2Myb_DNA-binding39.31.5e-12357410248
                      SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT....TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmg....kgRtlkqcksrwqkyl 48 
                      +rW+ ++++ +v+av+ +Gg+    ++++ +tm+    +g+t  ++ks++qky+
  OGLUM03G28630.1 357 LRWSDDLHKMFVEAVAYHGGPyeaKPTAVKETMQamgvTGLTTHNIKSHLQKYR 410
                      59***************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    
MAATAAYLPL RAQAQVGLAP LRPSGSAAAG ARLPGRTARR RLAARGGPEA AGIRAEAVPG  60
GGGVARRAAM VPPYNVLITG STKGIGYALA KEFLKAGDNV VICSRSAERV ESAVTDLKKE  120
FGEQHVWGIV CDVREGKDVK ALVDFARDKM KYIDIWINNA GSNAYSYKPL VETSDEALME  180
VITTNTLGLM ICCREAINMM RNQPRGGHIF NIDGAGSDGR PTPRFAAYGA TKRSVVHLTK  240
SLQAELQMNE VNNVMVHNLS PGMVTTDLLM SGATTKQVAD YLVPNIRAIP TNQSMKPTYI  300
RFLTGLKAYS RIFSRIAFGA RRNKIMSNSQ PAQEDDCMSS ILVSRLIRAM QPTRSYLRWS  360
DDLHKMFVEA VAYHGGPYEA KPTAVKETMQ AMGVTGLTTH NIKSHLQKYR ESFSSGVGSL  420
HDHDLLRTTS PSKEALDLAS EMVRDNDAAM AEIEMLNDLL LDHDIEMMER ELMSEIKLIE  480
HNFEISESAL DEYMDDLANY AFDLTGPANS SSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12730.12e-13G2-like family protein