PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G27650.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | CPP | ||||||||
Protein Properties | Length: 815aa MW: 89829.1 Da PI: 7.3677 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 28.9 | 2.3e-09 | 571 | 597 | 15 | 41 |
TCR 15 kkYCeCfaagkkCseeCkCedCkNkee 41 k YCeCfa++++Cse+C+C +C+N+++ OGLUM03G27650.1 571 KSYCECFASKVYCSESCSCRGCFNDHS 597 99**********************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 815 aa Download sequence |
MSIKIFRGEY DANITREEVV WSRMVLATKD GTIWARLFVV DREGYWSLSS ILRQWLGSET 60 NKEGARGGGR FEVVATTCEV TVVVVVGCMK EMSAGQFYCK GQERVDGGAG VKRRGAPQRK 120 GWDSPFLNFV KSLSPISSSQ PLDAVPNLQM IKSSDLVHIP SIFTSPEFTH FGLMNTSAKP 180 CQDGLSPYCH MTQIGRSSCI KQSGPMTIAS KNCSIDRSLS QAYHDSPDNA SILPTNLARC 240 IQLSSDTLGS DKRHGIAGKT DHETAQKHAK LSCFDQRCLD KMKQLTSGMN VQKRDLAKTH 300 NDEITACDWD YLGTQYDSSV VPESDLRFET AELLLETPKN GDAMPGKSFL PIVEANLENS 360 RRKLFQGSAD CYSQSAVDNI HAYCTSRGKE VATNHVSGIL PCPRESQLIP DHHFSDSLEV 420 PSDYMAMNPS AVSQHLRGLH RRSLFNDKVR DPTMGVQSVS NLGASTCATR HRSIPDDNYS 480 KLVGSPVCAL PNVDLHLVRM TEEMVPYNMT CTVNSTLSIS EHNTEISTVV PVNQLAPNTS 540 EMNTHNQGDY SSQATMPTSA GNSGQENPKR KSYCECFASK VYCSESCSCR GCFNDHSHAE 600 TVLSTRNRIE SRNPLAFAPK VIRTCGPGLE FGEDSNATPA SSRHKRGIEL FETKEIERAD 660 RKMKDHPKEE QSEMDKYHAL CEIWGVRSTE NLFTTPSMDS RRAFALFPSE CPKSSLTSST 720 RTSSHLHSPT RTDVLLSPFG SYTQMLLGNE ASDMLLQQGD SSCTASLRIA SPNKKRVSPL 780 RTGNTLSPTC RKELGLKSII PPFPSLTGDA NSELQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14770.1 | 1e-25 | CPP family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G27650.1 |