PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G25450.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 500aa MW: 53850.2 Da PI: 3.9551

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G25450.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	82.2	1e-25	7	145	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk..dke 91 l pG+rF+P+d+elv++yL +++++k+l+l+ vi ++d ++v Pw+L + +++ +e +fF+ ++ k+ +gkr++r + g+W+ + d e OGLUM03G25450.1 7 LLPGLRFDPSDDELVSRYLLRRIQQKPLPLDGVIVDADPLSVPPWTLLAD-HTRGDEAFFFAGARAKNGKGKRQKRtVEGGGFWQGQRMavDGE 99 579*************************999**********743.456789***************5555999665522222 PP NAM 92 vlsk..........kgel.....vglkktLvfykgrapkgektdWvmheyrl 128 + + ++ k +L f+ ++ ++g ++ Wvmhey++ OGLUM03G25450.1 100 R--LvvpgddggggG--DegleiTWRKYVLSFF-AEGERG-SSGWVMHEYAV 145 2..133456666550..155565899999**.444454.89*****86 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MAGADGLLPG LRFDPSDDEL VSRYLLRRIQ QKPLPLDGVI VDADPLSVPP WTLLADHTRG 60 DEAFFFAGAR AKNGKGKRQK RTVEGGGFWQ GQRMAVDGER LVVPGDDGGG GGDEGLEITW 120 RKYVLSFFAE GERGSSGWVM HEYAVTSPAD LASSQLRLYR VRFSGHGKKR KREPQCLDSH 180 DDDDGGDQES ATHRRAVAET TLFDGYVPRP AADGTDQGTY GVIDGESSLA SHCLPDQIVP 240 PAEEVDATAG VENPLLDEER WSPPQPALVK QNSYDLMAIS SLLFSDLPDR IDDDDLSVSQ 300 TEGTELSEQG SSGVIGDDYW RVFHGLSDLI ALPEVEADAT GGAETEKISL LDEERRPPPQ 360 PAPPTAALVP PLQGQSSYDL MADSSLLFAD LPGSIDDDEL QRSLRASDMP DQFLAQTEEA 420 GAGGGGGAAA ALNKQSNSSP LGVEVPMALS DLESPESMPL SDLEFPESID EVLSYIDFTT 480 DDTSCLDFDM DELFSDMPAD

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MAGADGLLPG LRFDPSDDEL VSRYLLRRIQ QKPLPLDGVI VDADPLSVPP WTLLADHTRG  60
DEAFFFAGAR AKNGKGKRQK RTVEGGGFWQ GQRMAVDGER LVVPGDDGGG GGDEGLEITW  120
RKYVLSFFAE GERGSSGWVM HEYAVTSPAD LASSQLRLYR VRFSGHGKKR KREPQCLDSH  180
DDDDGGDQES ATHRRAVAET TLFDGYVPRP AADGTDQGTY GVIDGESSLA SHCLPDQIVP  240
PAEEVDATAG VENPLLDEER WSPPQPALVK QNSYDLMAIS SLLFSDLPDR IDDDDLSVSQ  300
TEGTELSEQG SSGVIGDDYW RVFHGLSDLI ALPEVEADAT GGAETEKISL LDEERRPPPQ  360
PAPPTAALVP PLQGQSSYDL MADSSLLFAD LPGSIDDDEL QRSLRASDMP DQFLAQTEEA  420
GAGGGGGAAA ALNKQSNSSP LGVEVPMALS DLESPESMPL SDLEFPESID EVLSYIDFTT  480
DDTSCLDFDM DELFSDMPAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	4e-14	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G25450.1