PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G24690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | GRAS | ||||||||
Protein Properties | Length: 127aa MW: 14058.3 Da PI: 5.9713 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 60.3 | 4e-19 | 28 | 124 | 1 | 94 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPil 91 lv+ L++ A+ vs++++e+a+ +Larl e+as +g p++R+aayf e La +++r++++++++ pp+e +++ ++ ++al++++ ++Pil OGLUM03G24690.1 28 LVRMLTAWADSVSASNHEAANYYLARLCEMASLAGpMPIHRVAAYFIEVLALHIVRMWPHMFNISPPRELTNDAfsGDDDAMALRILNAITPIL 121 5789*******************************99*********************************988798999**************9 PP GRAS 92 kfs 94 ++ OGLUM03G24690.1 122 LLG 124 776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
MMPPPLSKFD ARNGVPTPGQ AEQETMELVR MLTAWADSVS ASNHEAANYY LARLCEMASL 60 AGPMPIHRVA AYFIEVLALH IVRMWPHMFN ISPPRELTND AFSGDDDAMA LRILNAITPI 120 LLLGKHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63100.1 | 3e-24 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G24690.1 |