PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G15970.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 355aa MW: 39504.7 Da PI: 7.4667

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G15970.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.7	1.5e-34	47	101	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLHerFveav+qLGG+ekAtPkti++lm+v+gLtl+h+kSHLQkYRl OGLUM03G15970.1 47 KPRLKWTPELHERFVEAVNQLGGPEKATPKTIMRLMGVPGLTLYHLKSHLQKYRL 101 79****************************************************8 PP
2	Myb_DNA-binding	73.4	3.4e-23	49	100	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++e++v+av+qlGg+ t+ktI+r mg g+tl+++ks++qky+ OGLUM03G15970.1 49 RLKWTPELHERFVEAVNQLGGPekaTPKTIMRLMGvPGLTLYHLKSHLQKYR 100 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MYHHQQQLQS HNQLLPSRQS FPSERHLLMQ GGSVSGESGL VLSTDAKPRL KWTPELHERF 60 VEAVNQLGGP EKATPKTIMR LMGVPGLTLY HLKSHLQKYR LSKNLHAQAN AGNVKNALVC 120 TTATEKPSEA NGSPVSHLNL GTQTNKSVHI GEALQMQIEV QRRLHEQLEV QRHLQLRIEA 180 QGKYLQSVLE KAQETLAKQN AGSVGLETAK MELSELVSKV STECLQHAFS GFEEIESSQM 240 LQGHTMHLGD GSVDSCLTAC DGSQKDQDIL SISLSAQKGK EIGCMSFDMH VKERGSEDLF 300 LDKLNRRPSN HPERCERRGG FSMSCQTANL DLNMNDTYDG PKHCKKFDLN GFSWA

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MYHHQQQLQS HNQLLPSRQS FPSERHLLMQ GGSVSGESGL VLSTDAKPRL KWTPELHERF  60
VEAVNQLGGP EKATPKTIMR LMGVPGLTLY HLKSHLQKYR LSKNLHAQAN AGNVKNALVC  120
TTATEKPSEA NGSPVSHLNL GTQTNKSVHI GEALQMQIEV QRRLHEQLEV QRHLQLRIEA  180
QGKYLQSVLE KAQETLAKQN AGSVGLETAK MELSELVSKV STECLQHAFS GFEEIESSQM  240
LQGHTMHLGD GSVDSCLTAC DGSQKDQDIL SISLSAQKGK EIGCMSFDMH VKERGSEDLF  300
LDKLNRRPSN HPERCERRGG FSMSCQTANL DLNMNDTYDG PKHCKKFDLN GFSWA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18240.1	9e-96	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G15970.1