PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G15460.2

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 488aa MW: 53048.3 Da PI: 9.8153

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G15460.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.4	2e-10	203	233	4	34
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 k+ rr+++NReAAr+sR+RKka++++Le OGLUM03G15460.2 203 QKVLRRLAQNREAARKSRLRKKAYVQQLESS 233 5899************************974 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MVQVLPQGKP IYNSLLPRLS SVPLLTKPHC SVGPWTHLSA TRPFSPTPPS FNPLTRAHAP 60 SPVVAFLASP LSLPSDQPDL GASPHLSLSL SARCRLDPAS TAEAAPGGGR RQLGSSESEH 120 GGGLSPRSPR RGGDSGISVI LGHLKVACIP VTKPGMADAS SRTDTSTVLD TDDKNQMVDG 180 QSGAIVPSNS SDRSDRSDKP MDQKVLRRLA QNREAARKSR LRKKAYVQQL ESSKLKLASL 240 EQEINKARQQ GIYISSSGDQ THAMSGNGAM TFDLEYARWL EEQNKQINEL RTAVNAHASD 300 SDLRLIVDGI MAHYDEIFRL KGVAAKADVF HILSGMWKTP AERCFLWLGG FRSSELLKLL 360 VNQLEPLTEQ QLLGLSNLQQ SSQQAEDALS QGMEALQQSL ADTLAGSLGP SGSSGNVANY 420 MGQMAMAMGK LGTLENFLRQ ADNLRQQTLH QMQRILTIRQ AARALLAIHD YFSRLRALSS 480 LWLARPRE

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MVQVLPQGKP IYNSLLPRLS SVPLLTKPHC SVGPWTHLSA TRPFSPTPPS FNPLTRAHAP  60
SPVVAFLASP LSLPSDQPDL GASPHLSLSL SARCRLDPAS TAEAAPGGGR RQLGSSESEH  120
GGGLSPRSPR RGGDSGISVI LGHLKVACIP VTKPGMADAS SRTDTSTVLD TDDKNQMVDG  180
QSGAIVPSNS SDRSDRSDKP MDQKVLRRLA QNREAARKSR LRKKAYVQQL ESSKLKLASL  240
EQEINKARQQ GIYISSSGDQ THAMSGNGAM TFDLEYARWL EEQNKQINEL RTAVNAHASD  300
SDLRLIVDGI MAHYDEIFRL KGVAAKADVF HILSGMWKTP AERCFLWLGG FRSSELLKLL  360
VNQLEPLTEQ QLLGLSNLQQ SSQQAEDALS QGMEALQQSL ADTLAGSLGP SGSSGNVANY  420
MGQMAMAMGK LGTLENFLRQ ADNLRQQTLH QMQRILTIRQ AARALLAIHD YFSRLRALSS  480
LWLARPRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.1	1e-137	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G15460.2