PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM03G04700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 596aa MW: 63223.9 Da PI: 6.6401 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 26.2 | 1.4e-08 | 352 | 389 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gL+ qV++WF N R + OGLUM03G04700.1 352 FEHflHPYPKDSEKLMLARQTGLSRGQVSNWFINARVR 389 554459******************************88 PP | |||||||
2 | BELL | 111.9 | 3.6e-36 | 213 | 283 | 1 | 71 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 erq+lq+k + L+ +l++Vd+rY++y++q+q+v+ssF+avag g+a+pYt+lAl++iSrhFr+L+dai q OGLUM03G04700.1 213 ERQDLQNKVTALMAMLDQVDRRYRHYHHQMQIVMSSFDAVAGGGAARPYTALALQTISRHFRSLRDAIGAQ 283 799*****************************************************************876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 596 aa Download sequence |
MATFFSSSTN QRDLTGGGGD GGDMSFQHYP PPSNPYSDSS AGGLIPLPAS IVSHSHIAHG 60 GGDEPAAFRE AATADGGEMG LQTQLLMAHG AAARGHQGGL SLSLGTQVPV SLYQYRPAGM 120 AAASLLSPSQ SSPMAGRSAQ NSIYVQNSRF LRAARELLDE VVNVRDAIKR KGDKNQGKDS 180 GECKGGDAAG DDKAGSNPQE QESNSAPELS PSERQDLQNK VTALMAMLDQ VDRRYRHYHH 240 QMQIVMSSFD AVAGGGAARP YTALALQTIS RHFRSLRDAI GAQAQAARRG LGEQDASAQG 300 GGGLSRLRYI DQQLRQQRAM QQFGMMQQPQ HAWRPQRGLP ESAVSVLRAW LFEHFLHPYP 360 KDSEKLMLAR QTGLSRGQVS NWFINARVRL WKPMIEEMYK EEFGTEMDSN SSSENGGKGK 420 DEAISSEDRD EFQSPSSAAA ARHAGVAGQL NNPFKSEAMG GAALDVGVGV VGLSSCLGGA 480 MGTYATGLNL NHHVHHPGAG GTSLLHDALH HHHHGGGGDA RFVSYGDMAD LGGGGGYDGG 540 SVSLTLGLQH CNNAGPVPAE QQGLLYGSAG DFDYINGSDD RQRFGPASQL LHDFVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G16400.1 | 2e-90 | TALE family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM03G04700.1 |