PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G02410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | Nin-like | ||||||||
Protein Properties | Length: 945aa MW: 104933 Da PI: 5.7264 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 89.4 | 2.8e-28 | 623 | 673 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl+dl+k+F++++k+AAk+Lgvc+T+LKriCRq+GI+RWP+Rkik++ OGLUM03G02410.1 623 EKTVSLQDLRKHFAGSLKEAAKNLGVCPTTLKRICRQHGINRWPSRKIKKV 673 799**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 945 aa Download sequence |
MEQKPPPPPR REEEEEDGLM GCGMSGTGDI AGGDLDLMEE FLLATPGLDL SEFWHPGAAS 60 PFSPLFDIGS SVTTLTTPAP PAAEDDRDEA EMPSSGGGGG GGGLEVSPAH RGWTFQTAPQ 120 EVAVEPTVKE RLRRALERIA SQSQSQAQRG DGELLVQVWV PTRIGDRQVL TTCGQPFWLD 180 RRNQRLASYR TVSMKYQFSA DESARADLGL PGRVFVGRVP EWTPDVRYFS TEEYPRVQHA 240 QYFDIRGSVA LPVFEPRSRA CLGVVELVMT TQKVNYSAEI ENICNALKEV DLRSSDVSSD 300 PRSKVVDASY RAIIPEIMDV LRAVCDTHNL PLAQTWIPCI CQAKRGSRHS DESYKHCVST 360 VDEACYVRDR SVLGFHQACS EHHLFRGEGV VGRAFGTNEP CFSPDITTYS KTQYPLSHHA 420 KLFGLRAAVA IRLRSVKTGS LDFVLEFFLP MKCINTEEQR AMLNSLSNTI QQVCYTLRVV 480 KPKELVNDGP FEISQPTRPE FYAKSVHENL DELCSGINVP GRTTSLEASE EVSSWIASLV 540 DAQNKGGKGE IDVDLPFGFS KQDDEGFSVT AGWHTSPVMA PDGSMFSGFK RHEDYDVKEN 600 TCSSDPSNSN SDKAVEKRRT KTEKTVSLQD LRKHFAGSLK EAAKNLGVCP TTLKRICRQH 660 GINRWPSRKI KKVGHSLKKL QMVIDSVHGP EGTVQLSSLY ENFTKTTWSE RELQGDVHFP 720 ASEQNFQLEP SVPDRPCEGR FTSHTSGSNS ISPSCSQSSN SSLGCSSVPK TQQQHGSAPQ 780 LAVKEEISMD ENQCSTLIKS ASHEEAELQM FVEERPTMLF RSQSQVLLSE HKPIENLSNV 840 QKARSDSLKI KAIYGEERCI FRLQPSWGFQ RLKEEIVKRF GISQDTHVDL KYLDDESEWV 900 LLTCDADLLE CIDVYKSSSN QTVRILVNPS IQPLLNASFG QTGLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35270.1 | 0.0 | Nin-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G02410.1 |