PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G38210.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 742aa MW: 82477.4 Da PI: 5.1391

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G38210.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	50.4	4.9e-16	612	641	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPk++ ++mkv+gLt++hvkSHLQkYR+ OGLUM02G38210.1 612 EATPKAVQKVMKVDGLTIYHVKSHLQKYRT 641 7****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 742 aa Download sequence
MEELLGLVRG FVDVLVLAGG RTSSGAAATW RSGDVKKALQ WALFFEEVFK NLRDDGQYDE 60 SASELDAALV QLASSPNFPK GIEDIRAKTL AMARELVVKH FLKTTNAENL GAVLQAVVEM 120 DMDGISASGE CNVCQEYVQS ILDMNLPSLM RTKNARDVGH STSSDEFCEE SLFTGNSQIL 180 LKELQKKLDS GSCISLAERE LNTLLKSMKK DSFDSAGSTL CTSATAQKTQ IIDKFILWKQ 240 WKAKCLSYLL DERTIRIMSG TNMIFNAPKE QWMGLFEPLK VSADSSQSGI IEVMELCLLG 300 LVARQWNSLI ESIMSHTFSS FPISKQYADL HQLLQGTTQD ECQDKLLGFK EMDICEYARQ 360 SLESEPYILW LLPPVLTAAA MPPRSSLFKI YLVEIDKQLG EAASKDRTVR FLKGFNVSTH 420 SMFKELNCQF SSGSSHGPQF KTVQEICTSN FTSDLYINNS ESPNGKLSSE SYAIDTSGCD 480 SSLPPTQSLY KGNPSSLRMV YPKVSEQNSW SQEPLPGPFV CPTSVDFFDQ QDMTIFDQQI 540 QDNIAASPST NLAKQNEWFS SGTSLQYLES SVSAGSVLKA VDATSTTPSN YLHCHAQRNT 600 SNPPNFNEIC SEATPKAVQK VMKVDGLTIY HVKSHLQKYR TVHHRPQLSD GRGMETTCEG 660 LKVQIGLQKQ LHEQLEIQRK LQLQVEEHSK YLAMIIEKQS ESLRQLGALP RSLDAPTQVL 720 DNRETCEGQT GDADSAEQKP EK

Sequence ? help Back to Top

Protein Sequence Length: 742 aa Download sequence

MEELLGLVRG FVDVLVLAGG RTSSGAAATW RSGDVKKALQ WALFFEEVFK NLRDDGQYDE  60
SASELDAALV QLASSPNFPK GIEDIRAKTL AMARELVVKH FLKTTNAENL GAVLQAVVEM  120
DMDGISASGE CNVCQEYVQS ILDMNLPSLM RTKNARDVGH STSSDEFCEE SLFTGNSQIL  180
LKELQKKLDS GSCISLAERE LNTLLKSMKK DSFDSAGSTL CTSATAQKTQ IIDKFILWKQ  240
WKAKCLSYLL DERTIRIMSG TNMIFNAPKE QWMGLFEPLK VSADSSQSGI IEVMELCLLG  300
LVARQWNSLI ESIMSHTFSS FPISKQYADL HQLLQGTTQD ECQDKLLGFK EMDICEYARQ  360
SLESEPYILW LLPPVLTAAA MPPRSSLFKI YLVEIDKQLG EAASKDRTVR FLKGFNVSTH  420
SMFKELNCQF SSGSSHGPQF KTVQEICTSN FTSDLYINNS ESPNGKLSSE SYAIDTSGCD  480
SSLPPTQSLY KGNPSSLRMV YPKVSEQNSW SQEPLPGPFV CPTSVDFFDQ QDMTIFDQQI  540
QDNIAASPST NLAKQNEWFS SGTSLQYLES SVSAGSVLKA VDATSTTPSN YLHCHAQRNT  600
SNPPNFNEIC SEATPKAVQK VMKVDGLTIY HVKSHLQKYR TVHHRPQLSD GRGMETTCEG  660
LKVQIGLQKQ LHEQLEIQRK LQLQVEEHSK YLAMIIEKQS ESLRQLGALP RSLDAPTQVL  720
DNRETCEGQT GDADSAEQKP EK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	3e-27	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G38210.1