PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G36100.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 365aa    MW: 40155.6 Da    PI: 4.644
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G36100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-18119168255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      +++G+r+++ +g+W+AeIrdp++     r++lg+f +aeeAa+a++a +++++g
  OGLUM02G36100.1 119 QFRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNSAEEAARAYDAEARRIRG 168
                      69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MCGGAIIHHL KGHPEGSRRA TEGLLWPEKK KPRWGGGGRR HFGGFVEEDD EDFEADFEEF  60
EVDSGDSDLE LGEEDDDDVV EIKPAAFKRA LSRDNLSTIT TAGFDGPAAK SAKRKRKNQF  120
RGIRQRPWGK WAAEIRDPRK GVRVWLGTFN SAEEAARAYD AEARRIRGKK AKVNFPEAPT  180
TAQKRRAGST TAKAPKSSVE QKPTVKPAFN NLANANAFVY PSANFTSNKP FIQPDNMPFV  240
PAMNSAAPIE DPIINSDQGS NSFGCSDFGW ENDTKTPDIT SIAPISTIAE VDESAFIKSS  300
TNPMVPPVME NSAVDLPDLE PYMRFLLDDG AGDSIDSLLN LDGSQDVVSN MDLWSFDDMP  360
VSDFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.13e-36ERF family protein