PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM02G33090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | TCP | ||||||||
Protein Properties | Length: 174aa MW: 19594.6 Da PI: 12.0502 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 55.9 | 1.7e-17 | 2 | 72 | 14 | 83 |
TCP 14 kvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssas 83 ++g+RdRR+Rls++ + f+d+qd+LG+ ++sk ieWL+ +a a l + +a + ++s + s++ OGLUM02G33090.1 2 SRGLRDRRIRLSVPMSIAFYDIQDRLGVNRPSKSIEWLICAALVARLLLRPPQRRPAPHPrRPSSGRPSEE 72 689************************************99988888777776666633333333333333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MSRGLRDRRI RLSVPMSIAF YDIQDRLGVN RPSKSIEWLI CAALVARLLL RPPQRRPAPH 60 PRRPSSGRPS EEQARMRKAT VAAPPGKWGE KRRKTRSWCA ARKAERIAKL RVWREGWMPR 120 REASTSAALG GQSWIRKPST PGSGDSCSCS DAKTAKRRWA EKVGEVVARE AGSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30210.2 | 9e-15 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM02G33090.1 |