PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G31980.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family MIKC_MADS
Protein Properties Length: 225aa    MW: 25315.8 Da    PI: 9.9198
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G31980.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.58.5e-291059251
                     ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
           SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                     ri+n++ rqvtfskRrng+lKKA+ELS+LCdaev +++fsstg+lye+ss
  OGLUM02G31980.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSS 59
                     8***********************************************96 PP

2K-box58.13.8e-20781671099
            K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                        + +++ ++e+a L+++++nLq+++++l+Ge+L+ L +++Lq Le++Le sl++iR +K  l++++  el +  + +++++ +L +kl+
  OGLUM02G31980.1  78 GGNATSEIKREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKGSLIHQENIELSRSLNVMSQQKLELYNKLQ 167
                      55678899***********************************************************99999999999999999999886 PP

Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELSILCD AEVGLVVFSS TGRLYEFSST  60
NMKTVIDRYT NAKEELLGGN ATSEIKREAA SLRQQLHNLQ ESHKQLMGEE LSGLGVRDLQ  120
GLENRLEISL RNIRMRKGSL IHQENIELSR SLNVMSQQKL ELYNKLQACE QRGATDANES  180
SSTPYSFRII QNANMPPSLE LSQSQQREGE CSKTAAPELG RLHLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.11e-77MIKC_MADS family protein