PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G30650.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family LBD
Protein Properties Length: 119aa    MW: 13246.2 Da    PI: 8.2892
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G30650.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26039.71.4e-12165660100
           DUF260  60 slvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                       lvyeA+ r+rdPvyG+vg i+ +q+q++ql+ +la+++ e
  OGLUM02G30650.1  16 RLVYEANDRMRDPVYGCVGAISFMQNQVSQLQMQLAVAQGE 56 
                      69**********************************99876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MCSGSPCASC KLLRRRLVYE ANDRMRDPVY GCVGAISFMQ NQVSQLQMQL AVAQGEILCI  60
QMQHRDGNEN EKNLRDLGCT FSTSCGPSRS VAGQAERFGG LQFIMGRNHF WASIWPIGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.13e-25LBD family protein