PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G29460.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 376aa MW: 40135.7 Da PI: 7.7184

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G29460.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.9	4.1e-32	196	249	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ OGLUM02G29460.1 196 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 249 9****************************************************7 PP
2	Myb_DNA-binding	48.9	1.5e-15	197	248	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ OGLUM02G29460.1 197 RMRWTTSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 248 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MELFPAHPDL QLQISPPPAT KSMDLGFWKR ALETSTTTTT AAAAASTGPS VATSSSPPVA 60 SGGVGGGAGG FYQQAAVAPA ANGHGHGHGH HHHHHQHHQL GGALQFLHRT QPIPPQDAAA 120 GGGLQDLAFA RPIRGIPVYN TSRPLPFLQS HHLQHHQHCY ADAIGVAPGA GPRSPSKQAA 180 ALRLAAAPAK RGARAPRMRW TTSLHARFVH AVELLGGHER ATPKSVLELM DVKDLTLAHV 240 KSHLQMYRTI KTTDHKQPAP PYGQTKTIIE IPDDNLFDIN NTSGSESSVQ QQSNLDGNEQ 300 GSSMCALRSN NSSSRGAWFH DKSRDATPGD IKSFEDVQSQ SPEDDDASDL NSPPFQIPET 360 TVSAMKPNLD FTLGRM

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MELFPAHPDL QLQISPPPAT KSMDLGFWKR ALETSTTTTT AAAAASTGPS VATSSSPPVA  60
SGGVGGGAGG FYQQAAVAPA ANGHGHGHGH HHHHHQHHQL GGALQFLHRT QPIPPQDAAA  120
GGGLQDLAFA RPIRGIPVYN TSRPLPFLQS HHLQHHQHCY ADAIGVAPGA GPRSPSKQAA  180
ALRLAAAPAK RGARAPRMRW TTSLHARFVH AVELLGGHER ATPKSVLELM DVKDLTLAHV  240
KSHLQMYRTI KTTDHKQPAP PYGQTKTIIE IPDDNLFDIN NTSGSESSVQ QQSNLDGNEQ  300
GSSMCALRSN NSSSRGAWFH DKSRDATPGD IKSFEDVQSQ SPEDDDASDL NSPPFQIPET  360
TVSAMKPNLD FTLGRM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17695.1	4e-32	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G29460.1