PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G27010.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 293aa    MW: 29880.6 Da    PI: 4.8161
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G27010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.6e-19103153155
              AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      + y+GVr+++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  OGLUM02G27010.1 103 PSYRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 153
                      57*****887.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MEAAAIHAPT TTTSSDSGSC VTNGTRQKRE ISKHKQLKRK RSTSPAPPPG CGGGQGQEAA  60
VETDADAGAA GRGGGAGEEE SSSCGGAGAG EGERNRGDAG RHPSYRGVRR RSWGKWVSEI  120
REPRKKSRIW LGTFPTAEMA ARAHDVAALA IKGRAAHLNF SSLAHTLPRP ASTSPSDIQA  180
AAALAAAAAA TDQCESSSSA VAAATATDAE AAESTSSAAA SPCAATSSVE ENALFDLPDL  240
LLDLSDGLWC SPVWTTAPAD QYDAGDDGDD AAAPLLWAEQ CWMDAPAAPV QPD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.13e-41ERF family protein