PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G26870.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 347aa    MW: 36468.7 Da    PI: 5.7498
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G26870.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.6e-20154205256
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      +y+GVr+++ +g+++AeIrdp+++g   r++lg+++ta eAa+a+++a+ +++g+
  OGLUM02G26870.1 154 KYRGVRQRP-WGKFAAEIRDPKKRG--SRVWLGTYDTAIEAARAYDRAAFRMRGA 205
                      8********.***********8876..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MDFSGDIDDL ISLQLLHDQL LGVEADACLP VAVHHDGVAA YAEHQQGFHP AAFLPQQPMT  60
MTPAGYVDMA NDQYLGAHAA AGEAEAVYRA AAAEPVMIRF GGEVSPVSDP RRPPLTISLP  120
PTSHAWAAAE AVHPAALLQA QAAAAAADPN DFRKYRGVRQ RPWGKFAAEI RDPKKRGSRV  180
WLGTYDTAIE AARAYDRAAF RMRGAKAILN FPNEVGSRGA DFLAPPPPPP PPTTSTHGKR  240
KRHETAAADP DVEVIGESSK SVKTETYTSP ASSSLASTTT STVTSSSTSP SPSSEAAACG  300
GGGGGGGELF VPPIPSSWSW DQLEGFFGIL SPLSPHPQMG FPEVAVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.12e-22ERF family protein