PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM02G18780.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 155aa MW: 15884.7 Da PI: 10.4052 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.2 | 1.1e-09 | 86 | 107 | 2 | 24 |
AP2 2 gykGVrwdkkrgrWvAeIrdpse 24 +y+GVr+++ +g+W+AeIrdp++ OGLUM02G18780.1 86 HYRGVRRRP-WGKWAAEIRDPNK 107 7********.**********843 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MSSRQPIGSG GGGAPPDWHD VEPQWQPVDD VVTVAAAAAY LAAPAGATLS SESADRRWRP 60 VGPSAAAAAA ALQAVEAQGA AAAERHYRGV RRRPWGKWAA EIRDPNKAAR ILDFAAQRLV 120 GVSPAMAPRP PSTLPTTTTA ASSPSAWPHG GGHGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33710.1 | 7e-12 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM02G18780.1 |