PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G14610.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 412aa MW: 44579.2 Da PI: 6.6338

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G14610.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.1	3.6e-32	235	290	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 kpr++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ OGLUM02G14610.1 235 KPRRCWAPELHRRFLQALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 290 79****************************************************97 PP
2	Myb_DNA-binding	39.6	1.2e-12	237	288	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W +e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ OGLUM02G14610.1 237 RRCWAPELHRRFLQALQQLGGShvaTPKQIRELMKvDGLTNDEVKSHLQKYR 288 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MEVDHADRDG ARRRCREYLL ALEEERRKIQ VFQRELPLCF DLVTQTIEGM RSQMDAAGSE 60 ETVSDQGPPP VLEEFIPLKP SLSLSSSEEE STHADAAKSG KKEEAETSER HSSPPPPPPE 120 AKKVTPDWLQ SVQLWSQEEP QQPSSPSPTP TKDLPCKPVA LNARKAGGAF QPFEKEKRAE 180 LPASSTTAAA SSTVVGDSGD KPTDDDTEKH METDKDNDKD AKDKDKEGQS QPHRKPRRCW 240 APELHRRFLQ ALQQLGGSHV ATPKQIRELM KVDGLTNDEV KSHLQKYRLH TRRPSSTGQS 300 SAAAGVPAPP APQFVVVGSI WVPPPEYAAA AAAQQHVQLA AAGNNASGSA NPVYAPVAML 360 PAGLQPHSHR KQHQQQQQGQ RHSGSEGRRS GDAGDGSSSS PAVSSSSQTT SA

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MEVDHADRDG ARRRCREYLL ALEEERRKIQ VFQRELPLCF DLVTQTIEGM RSQMDAAGSE  60
ETVSDQGPPP VLEEFIPLKP SLSLSSSEEE STHADAAKSG KKEEAETSER HSSPPPPPPE  120
AKKVTPDWLQ SVQLWSQEEP QQPSSPSPTP TKDLPCKPVA LNARKAGGAF QPFEKEKRAE  180
LPASSTTAAA SSTVVGDSGD KPTDDDTEKH METDKDNDKD AKDKDKEGQS QPHRKPRRCW  240
APELHRRFLQ ALQQLGGSHV ATPKQIRELM KVDGLTNDEV KSHLQKYRLH TRRPSSTGQS  300
SAAAGVPAPP APQFVVVGSI WVPPPEYAAA AAAQQHVQLA AAGNNASGSA NPVYAPVAML  360
PAGLQPHSHR KQHQQQQQGQ RHSGSEGRRS GDAGDGSSSS PAVSSSSQTT SA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	3e-57	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G14610.1