PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G13300.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family C3H
Protein Properties Length: 327aa    MW: 35757.4 Da    PI: 7.1876
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G13300.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH38.22.4e-12189214126
                      --S---SGGGGTS--TTTTT-SS-SS CS
          zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                      y   +C+++ +tG+C yGd+CkF+H+
  OGLUM02G13300.1 189 YQPDICKDYKETGYCGYGDSCKFMHD 214
                      67789********************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MADGGGGGGE AGSGGSAPVC SFVRKPPKNI RKRPTAPAGS DDDDEDGSGA IAAARAKKAP  60
SSTSKLFFSS ADGSSEPRRF QYESSRTIQA STDSRATATL ETETEFDRDA RAIRERQLKQ  120
AEESLKKNPS APASGSGSGS GEVYKGIHGY TDYKAGFRRE HTVSSEKAGG SHGPLRASAH  180
IRLSARFDYQ PDICKDYKET GYCGYGDSCK FMHDRGDYKS GWQIEKEWEE AEKARKRRIA  240
MGGDGSDDEA GEEDDDDDEE ALPFACYICR EPFVDPVVTK CKHYFCEHCA LKHHSKNKKC  300
FVCNKPTLGI FNAAQEIRKK MAQDKKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01350.11e-120C3H family protein