PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G09950.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

BES1

Protein Properties

Length: 375aa MW: 38783.2 Da PI: 9.567

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G09950.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	172.4	2.3e-53	5	165	1	145
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr..........kgskpl.eeaeaag 83 gg+gr ptw+ErEnn+rRERrRRaiaakiyaGLRa+Gny lpk++DnneVlkALc+eAGw+ve+DGttyr ++ k+ +++++ OGLUM02G09950.1 5 GGGGRVPTWRERENNRRRERRRRAIAAKIYAGLRAYGNYTLPKHCDNNEVLKALCNEAGWTVEPDGTTYRkywsldrieaAHVKKGlVKEAIME 98 689*****************************************************************554444443323333322233333 PP DUF822 84 ssasaspesslqsslkssalaspvesysaspk.sssfpspssldsislasa....asllpvlsvlsl 145 + + p s+l +l s asp++sy++sp+ +ssfps+ s+++i+l +sl+p+l++ls+ OGLUM02G09950.1 99 TKGCKPPASELADQLGRSPSASPCSSYQPSPRgTSSFPSSGSSSQITLGGGggegSSLIPWLKTLSS 165 333345556666788889999****99746899999999998768899999**999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MMNGGGGGRV PTWRERENNR RRERRRRAIA AKIYAGLRAY GNYTLPKHCD NNEVLKALCN 60 EAGWTVEPDG TTYRKYWSLD RIEAAHVKKG LVKEAIMETK GCKPPASELA DQLGRSPSAS 120 PCSSYQPSPR GTSSFPSSGS SSQITLGGGG GEGSSLIPWL KTLSSAGVGI GGGSSSKFPA 180 HYSYFGGGSI SAPVTPPSGS PPRTPRLKTA AWEEYHHHHA GSVLPPWATV GASYAYAASS 240 SLPNSTPPSP RRKVAAAAAA GGGGNDAAAW LAGFQISSAG PSSPTYSLVA PPPNPFGAAA 300 AAAGSSSRVM SGACSPVAGG DVQMADAARR EFAFGGEGGK MTGLVKAWEG ERIHEECGSD 360 DLELTLGSSM TRGDR

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MMNGGGGGRV PTWRERENNR RRERRRRAIA AKIYAGLRAY GNYTLPKHCD NNEVLKALCN  60
EAGWTVEPDG TTYRKYWSLD RIEAAHVKKG LVKEAIMETK GCKPPASELA DQLGRSPSAS  120
PCSSYQPSPR GTSSFPSSGS SSQITLGGGG GEGSSLIPWL KTLSSAGVGI GGGSSSKFPA  180
HYSYFGGGSI SAPVTPPSGS PPRTPRLKTA AWEEYHHHHA GSVLPPWATV GASYAYAASS  240
SLPNSTPPSP RRKVAAAAAA GGGGNDAAAW LAGFQISSAG PSSPTYSLVA PPPNPFGAAA  300
AAAGSSSRVM SGACSPVAGG DVQMADAARR EFAFGGEGGK MTGLVKAWEG ERIHEECGSD  360
DLELTLGSSM TRGDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	7e-43	BES1 family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G09950.1