PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G06260.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

TALE

Protein Properties

Length: 301aa MW: 32715.8 Da PI: 6.3532

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G06260.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.9	1.5e-07	251	284	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + OGLUM02G06260.1 251 KWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 284 469*****************************87 PP
2	ELK	26.9	1.1e-09	205	226	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++L+++Y+++L+++++E++ OGLUM02G06260.1 205 ELKNELKQGYKEKLVDIREEIL 226 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MAFHYPDHGL AMDPSSAAAS SPNPSFSPGG GGGVGVGGGE REKAAVAAHP LYERLLEAHV 60 ACLRVATPVD QLPRIDAQIA ARPPPLAAAS AAAAAGGPSG GEELDLFMTH YVLLLCSFKE 120 QLQQHVRVHA MEAVMGCWEL EQSLQSLTGA SPGEGTGATM SDDEDNQVDS EANMFDGNDG 180 SDGMGFGPLM LTEGERSLVE RVRHELKNEL KQGYKEKLVD IREEILRKRR AGKLPGDTAS 240 ILKAWWQAHS KWPYPTEDDK ARLVQETGLQ LKQINNWFIN QRKRNWHSNP ASSGEKTKKK 300 R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	282	301	RKRNWHSNPASSGEKTKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-143	TALE family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G06260.1