PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G05510.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 385aa MW: 40477.7 Da PI: 7.697

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G05510.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.7	1.3e-33	46	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl OGLUM02G05510.1 46 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 100 79****************************************************8 PP
2	Myb_DNA-binding	72.4	6.9e-23	48	99	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ OGLUM02G05510.1 48 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 99 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MFPGSKKGGG GGAAVSSGDG GGGRAAAAAA MCVQGDSGLV LTTDPKPRLR WTVELHERFV 60 DAVTQLGGPD KATPKTIMRV MGVKGLTLYH LKSHLQKFRL GKQPHKEFSE HSVKEAAAME 120 MQRNATSSSG IMGRSMNHDR NVNDAIRMQM EVQRRLHEQL EVQKHLQMRI EAQGKYMQSI 180 LEKAYQTLAA GDVAAAVACG PAGYKSLGNH QAAVLDVCSM GFPSLQDLHM YGGAGGGHLD 240 LQQQQPPAST MESFFACGDG GGSLGKTAAK TRHYGGAGKS PMMWGVDDDD DDDDPAGKCG 300 GGGHHQLQMA PPPMMDGGID VMDSLAADVY EPKPIMSGDS TGSKGGGYDV ATAASKLERP 360 SPRRPPQLGS PSVMAGAQTR NLSYG

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MFPGSKKGGG GGAAVSSGDG GGGRAAAAAA MCVQGDSGLV LTTDPKPRLR WTVELHERFV  60
DAVTQLGGPD KATPKTIMRV MGVKGLTLYH LKSHLQKFRL GKQPHKEFSE HSVKEAAAME  120
MQRNATSSSG IMGRSMNHDR NVNDAIRMQM EVQRRLHEQL EVQKHLQMRI EAQGKYMQSI  180
LEKAYQTLAA GDVAAAVACG PAGYKSLGNH QAAVLDVCSM GFPSLQDLHM YGGAGGGHLD  240
LQQQQPPAST MESFFACGDG GGSLGKTAAK TRHYGGAGKS PMMWGVDDDD DDDDPAGKCG  300
GGGHHQLQMA PPPMMDGGID VMDSLAADVY EPKPIMSGDS TGSKGGGYDV ATAASKLERP  360
SPRRPPQLGS PSVMAGAQTR NLSYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	2e-94	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G05510.1