PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM02G02840.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | Nin-like | ||||||||
Protein Properties | Length: 721aa MW: 75953.2 Da PI: 5.7973 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 90.3 | 1.5e-28 | 480 | 531 | 1 | 52 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+++le+l+k+Fs+++kdAA++Lgvc+T++KriCRq+GI+RWP+Rki+++ OGLUM02G02840.1 480 AEKSVTLEELQKHFSGSLKDAARSLGVCPTTMKRICRQHGIPRWPFRKISKV 531 5899*********************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 721 aa Download sequence |
MERVLGGFNL LLQRGGAAGD RGSEGGGGGS PGTEEEEAAV AVKQRIARAL RLYKEAAGGG 60 GWMVQVWAPA RDGARRVLAT RGQPFVLASQ CHRLFQYRTV SLTRVFPVGG AAAADEQGLP 120 ARAFDAGAPE WTPNVQCYGS GEYARISYAL IYDIQGSLAL PILDPDDASS PLAVLELVTT 180 APLLRVSGEV ANLCNALQAV SLRGAGICNS VAEIVNRDAT RAAMAEVSEL LTTVCEAHKL 240 PLAQTWVRCR SCGGGGEATE KAALTTAGAP FHLAAGADAR GFRDACVEHH LRRGQGLVGS 300 TAAAAAAARA PGGGLCADVA RCSKDDYPLA HYAGMYGLAG CLVLRAELSA AAMADAAGGG 360 DEEDCVVLEL FLPPDCTGVV EQKAAVDAIS ATIKQCSGNL KAIVISNLDD LFLDTMADGD 420 QQLRHEMDDL GDDQRCSDEE DLQLLENTNI GELNIHNEDQ IRNEDPTSQV GKNKTRRGKA 480 EKSVTLEELQ KHFSGSLKDA ARSLGVCPTT MKRICRQHGI PRWPFRKISK VNRSLDKMKR 540 VMESVNCSPS PPVAMLMPAR PALLLPPPPP PPRPCLSSTV GETSSHGSCQ APPPHAKTAL 600 QKPPSWCSNG DGVVTIKASH RGDIIRFRVP CSAGVTAVKA EVAKRLSLDA GAFDVKYLDD 660 DHEWVLLSCD ADFQECLDVV PALPSMSVTA RSGSGAAAPV VVRLMVQEVA DNIGSSCASS 720 D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 1e-109 | Nin-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM02G02840.1 |