PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G02370.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

BES1

Protein Properties

Length: 687aa MW: 77093.5 Da PI: 7.1548

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G02370.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	171.8	3.7e-53	53	203	1	141
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasaspes 92 gg+g++++++E+E++k+RER+RRai++++++GLR++Gn++lp+raD+n+Vl+AL+r+AGw+v++DGtt+r++s+pl ++++ g ++ +s+e+ OGLUM02G02370.1 53 GGGGEREREREKERTKLRERHRRAITSRMLSGLRQHGNFPLPARADMNDVLAALARAAGWTVHPDGTTFRASSQPLhpPTPQSPGIFHVNSVET 146 68999********************************************************************998999*********** PP DUF822 93 slq.sslkssalaspvesysaspksssfpspssldsislasa.......asllpvls 141 ++ s+l+s+a+ +p++s+++++++++++spsslds+ +a++ ++ +v+s OGLUM02G02370.1 147 PSFtSVLNSYAIGTPLDSQASMLQTDDSLSPSSLDSVVVADQsiknekyGNSDSVSS 203 99899********************************998666655544444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 687 aa Download sequence
MSLKHPHSPV LDGDPPPHRR PRGLVSTPPP PAVAADPSPS PAAPPPRRRG GGGGGGERER 60 EREKERTKLR ERHRRAITSR MLSGLRQHGN FPLPARADMN DVLAALARAA GWTVHPDGTT 120 FRASSQPLHP PTPQSPGIFH VNSVETPSFT SVLNSYAIGT PLDSQASMLQ TDDSLSPSSL 180 DSVVVADQSI KNEKYGNSDS VSSLNCLENH QMGIINSHCQ LIDPEGIRAE LMHLKSLNVD 240 GVIVDCWWGI VEAWIPHKYE WSGYRDLFGI IKEFKLKVQV VLSFHGSGET GSGGVSLPKW 300 VMEIAQENQD VFFTDREGRR NMECLSWGID KERVLRGRTG IEAYFDFMRS FHMEFRNLTE 360 EGLISAIEIG LGVSGELKYP SCPERMGWRY PGIGEFQCYD RYMQKNLRQA ALSRGHLFWA 420 RGPDNAGYYN SRPHETGFFC DGGDYDSYYG RFFLNWYSGI LIDHVDQVLS LATLAFDGVE 480 TVVKIPSIYW WYRTASHAAE LTAGFYNPTN RDGYSPVFRM LKKHSVILKF VCYGPEFTIQ 540 ENNEAFADPE GLTWQVMNAA WDHGLSISVE SALPCLDGEM YSQILDTAKP RHDPDRHHVS 600 FFAYRQLPSF LLQRDVCFSE LGNFVKCMHD GSLIKIVVRV RIIIAHQSGS SALDVLMQRL 660 TVLCIRGVST YPIKIIRSRY LTTVIAL

Sequence ? help Back to Top

Protein Sequence Length: 687 aa Download sequence

MSLKHPHSPV LDGDPPPHRR PRGLVSTPPP PAVAADPSPS PAAPPPRRRG GGGGGGERER  60
EREKERTKLR ERHRRAITSR MLSGLRQHGN FPLPARADMN DVLAALARAA GWTVHPDGTT  120
FRASSQPLHP PTPQSPGIFH VNSVETPSFT SVLNSYAIGT PLDSQASMLQ TDDSLSPSSL  180
DSVVVADQSI KNEKYGNSDS VSSLNCLENH QMGIINSHCQ LIDPEGIRAE LMHLKSLNVD  240
GVIVDCWWGI VEAWIPHKYE WSGYRDLFGI IKEFKLKVQV VLSFHGSGET GSGGVSLPKW  300
VMEIAQENQD VFFTDREGRR NMECLSWGID KERVLRGRTG IEAYFDFMRS FHMEFRNLTE  360
EGLISAIEIG LGVSGELKYP SCPERMGWRY PGIGEFQCYD RYMQKNLRQA ALSRGHLFWA  420
RGPDNAGYYN SRPHETGFFC DGGDYDSYYG RFFLNWYSGI LIDHVDQVLS LATLAFDGVE  480
TVVKIPSIYW WYRTASHAAE LTAGFYNPTN RDGYSPVFRM LKKHSVILKF VCYGPEFTIQ  540
ENNEAFADPE GLTWQVMNAA WDHGLSISVE SALPCLDGEM YSQILDTAKP RHDPDRHHVS  600
FFAYRQLPSF LLQRDVCFSE LGNFVKCMHD GSLIKIVVRV RIIIAHQSGS SALDVLMQRL  660
TVLCIRGVST YPIKIIRSRY LTTVIAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.2	0.0	BES1 family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G02370.1