PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G02110.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 335aa MW: 35915 Da PI: 5.2405

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G02110.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.9	3.3e-11	217	247	1	31
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeL 31 e+elk+++rkq+NRe+ArrsR+RK+ ++ L OGLUM02G02110.1 217 ERELKKQKRKQSNRESARRSRLRKQNIMDSL 247 89***********************999887 PP
2	bZIP_1	30.8	6.4e-10	255	294	24	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 24 KkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ae+eeL ++++L aeN++L+ ele++kke+++l s++ OGLUM02G02110.1 255 FQAECEELSVRADNLRAENSSLRAELERIKKEYEALLSHN 294 59**********************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MGTNDPGTPS KATKASEPEQ SPATTSGTTA PVYPEWPGFQ AYSAIPPHGF FPPPVAASPQ 60 AHPYMWGAQG VHPFNHYPML ANGNVETAGT APGASEINGK NELGRTSGPS ANGITSHSES 120 GSESESEGSD ANSQNDSHSK ENDVKEDGSS QNGISHTALN QNMSMAPTQT GVVIGGVAPT 180 TNLNIGMDYW GAAGSSPVPA MHGKASSGSV RGEQWDEREL KKQKRKQSNR ESARRSRLRK 240 QNIMDSLIEA PKYLFQAECE ELSVRADNLR AENSSLRAEL ERIKKEYEAL LSHNASLKEK 300 LEGNSDSIPY MNEQNDTNGT HQKQQDSDAQ PNDAP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	234	240	RRSRLRK
2	234	241	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32150.1	8e-53	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G02110.1