PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM01G46800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | Trihelix | ||||||||
Protein Properties | Length: 307aa MW: 32423 Da PI: 8.8617 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 76.2 | 5.3e-24 | 32 | 103 | 1 | 71 |
trihelix 1 rWtkqevlaLiearremeerlrrgklk.kplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 rWt++e+l+L++arr me+r rr+ + +W++vs+++r++g+er+p qC+++w nl+++ kki ++ek+ OGLUM01G46800.1 32 RWTRHETLVLLQARRAMEHRGRRSPQPvRLKWAAVSAYCRRHGVERGPMQCRKRWGNLSWDLKKIVAWEKNL 103 8**********************97764889**************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MSGAANATSP AAGAGTPRSR XGAGTPRSRL PRWTRHETLV LLQARRAMEH RGRRSPQPVR 60 LKWAAVSAYC RRHGVERGPM QCRKRWGNLS WDLKKIVAWE KNLAAVVSGA GDNAVAAGEG 120 EGEAPPPPRL ESFWDMRGEQ RRARQLPSSF DREVYDALVG GHGAAPPSDF GEDLADGDGV 180 DADELPPPPL MVMPISATVS AKRGGAASDK NSTSQHDGGG GGGLKDSEAT YGAGVGGEEG 240 TTTATATATT TSIGRQVIEA LERGNRMLGD QLEAQRAAWD AEREQRVALL AAVDKLAGAV 300 CRIADKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 2e-43 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM01G46800.1 |